PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cla019701
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Citrullus
Family ERF
Protein Properties Length: 156aa    MW: 16962.2 Da    PI: 10.2767
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cla019701genomeICuGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.32.5e-20857255
        AP2  2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
               +y+GVr ++ +gr++AeIrd ++    ++r++lg+f+t+eeAa a++ a+++l+g
  Cla019701  8 HYRGVRKRP-WGRYAAEIRDpWK----KTRVWLGTFDTPEEAALAYDGAARSLRG 57
               69*******.**********883....5*************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541711.63E-22866IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.104.3E-32865IPR001471AP2/ERF domain
PROSITE profilePS5103222.761865IPR001471AP2/ERF domain
SMARTSM003802.3E-36871IPR001471AP2/ERF domain
CDDcd000184.83E-30865No hitNo description
PfamPF008472.1E-13857IPR001471AP2/ERF domain
PRINTSPR003674.3E-11920IPR001471AP2/ERF domain
PRINTSPR003674.3E-113147IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 156 aa     Download sequence    Send to blast
MASTRDGHYR GVRKRPWGRY AAEIRDPWKK TRVWLGTFDT PEEAALAYDG AARSLRGSKA  60
KTNFPPPVTG LSLDLNVSGP WPNVTTAASA PSSSARFLLG DFLRHGARND MCNLNVEASS  120
VLVDSSAPVT TATASFIGHV RRGLPFDLNE PPPVWL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3gcc_A2e-22869567ATERF1
2gcc_A2e-22869567ATERF1
1gcc_A2e-22868263ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00645PBMTransfer from LOC_Os05g41760Download
Motif logo
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008442801.12e-84PREDICTED: ethylene-responsive transcription factor 12
SwissprotQ94ID62e-45ERF81_ARATH; Ethylene-responsive transcription factor 12
TrEMBLA0A0A0LSE47e-83A0A0A0LSE4_CUCSA; Uncharacterized protein
STRINGVIT_10s0003g00130.t011e-62(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF33034189
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28360.12e-45ERF domain protein 12